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UAV 3D Crop Phenotyping: From Image Acquisition to Machine Learning Modeling

· 阅读需 4 分钟
Liangchao Deng
Ph.D. Candidate @ SHZU @CAS-Cemps

1. Flight Path Design and Image Acquisition

UAV image acquisition employs a CCO (Cross-Complementary Overlap) flight path design strategy. This strategy enhances viewpoint diversity through multi-directional cross-flight paths to strengthen geometric constraints for 3D reconstruction. Flight Path Design Diagram

Key Design Points:

  • Multi sets of flight paths in different directions: Ensures multi-angle capture of crop canopy structure
  • Forward and side overlap rates higher than conventional orthophoto requirements: Provides sufficient matching points for SfM reconstruction
  • Image acquisition primarily serves 3D reconstruction goals: Rather than only satisfying orthophoto mosaic requirements

Based on industry-grade UAV platforms, multi-view RGB images of farmland are collected to provide unified data sources for subsequent orthophoto mosaic and 3D modeling.

Root Quantify: Python-Based Root System Image Processing Tool

· 阅读需 2 分钟
Liangchao Deng
Ph.D. Candidate @ SHZU @CAS-Cemps

Overview

Root Quantify is a Python-based tool designed for processing root system images. It provides a complete pipeline for analyzing root images with the following capabilities:

Key Features:

  • Batch Processing: Automatically iterates through all images in a selected folder
  • Interactive ROI Selection: Users click to select polygon vertices to define the region of interest (ROI)
  • Digital Image Processing: Performs background estimation, shadow removal, binarization, and inversion
  • Manual Correction: Allows manual editing of processed ROI with adjustable brush size
  • Dual-Window Preview: Left window shows original image, right window handles ROI selection and processing
  • Automatic Archiving: Saves processed images and moves originals to prevent reprocessing

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